Have questions? We're here.
Cultivated fields surrounded by the Andes Mountains

Ecuador Small Ship Cruises

Travel made your way
Talk with an expert
Build your ideal Ecuador trip. Call 1.406.541.2677
Start Planning My Trip
Filter (224 Results)
  • Start Date
    OR, More specific start
  • Length
    to
  • Price
    to
  • Activity Level
  • Experiences
  • Activities
  • Ships
  • Destinations
    • Ecuador
Blue-footed booby mating dance
from$1,650
EXPLORE

Southeast Islands

San Cristobal - Santa Cruz - 4 Day Itinerary aboard Galaxy Orion
  • Venture to Lobos Island
  • Step into Post Office Bay's history
  • Explore Punta Cormorant
Starts / Ends:
San Cristobal Airport / Charles Darwin Center
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Embark on a 4-day cruise through the Southeast Islands aboard Galaxy Orion from San Cristobal to Santa Cruz. Explore Lobos Island's serene beauty, with sea lion pups and frigatebirds creating a lively atmosphere. Gardner Bay offers a tropical oasis, where sun-basking sea lions steal the show. …
Cruise Details
0
Aida Maria
from$106,957
EXPLORE

Private Charter - Island Circumnavigation Aboard Aida Maria

15 Day Itinerary aboard Aida Maria
  • Visit a flamingo lagoon
  • Snorkel with white-tipped sharks
  • Explore the red beaches of Rabida
  • Watch sea lions relax on the shore
Starts / Ends:
Baltra / Baltra
Activities:
Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Take an epic private cruise around the Galapagos on the highly-rated yet affordable Aida Maria yacht. This trip includes stops to some of the most exciting places in the Galapagos like Rabida, Isabela, Fernandina and Santa Fe. Get a close up look at sea lions, rays, tortoises, blue footed boobies, …
Cruise Details
0
Aida Maria
from$56,977
EXPLORE

Private Charter - Eastern Islands Aboard Aida Maria

8 Day Itinerary aboard Aida Maria
  • Explore the beaches of Las Bachas
  • Visit Black Turtle Cove
  • Snorkel by Cerro Dragon
  • Navigate around Kicker Rock
Starts / Ends:
Baltra / San Cristobal Airport
Activities:
Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Visit some of the most popular destinations such as Bartolome, Genovesa and Floreana. Experience a wonderful time snorkeling, hiking, viewing wildlife, and exploring volcanoes. Your bilingual guides help you learn about the history, culture, plants, and animals of the Galapagos. Enjoy the wonders …
Cruise Details
0
The Aida Maria
from$56,977
EXPLORE

Private Charter - Western Islands Aboard Aida Maria

8 Day Itinerary aboard Aida Maria
  • Witness giant tortoises
  • Follow a path to a forest of cacti
  • Hike to the Sierra Negra Volcano
  • Explore coastal lagoons
Starts / Ends:
San Cristobal Airport / Baltra
Activities:
Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
This 8-day Western Islands Galapagos charter explores the wildlife-rich shores of Santa Fe, Isabela, Rabida and more! Join this unique small ship adventure! Learn about the flora and fauna from your guides. Watch sea lions play on the shore, snorkel, and visit the Wall of Tears on your tour aboard …
Cruise Details
0
Aida Maria
from$38,984
EXPLORE

Private Charter - Northern Islands Aboard Aida Maria

5 Day Itinerary aboard Aida Maria
  • Take a tour around Darwin Bay
  • Snorkel off the beach of Las Bachas
  • View Daphne Island, a volcanic cone
Starts / Ends:
Baltra / Baltra
Activities:
Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Join the Aida Maria on this 5-day private voyage through the northern islands of the Galapagos. Visit some of the best wildlife-viewing spots in the archipelago as well as beautiful locations to enjoy all the sights, sounds, and fun this unique places has to offer. The Galapagos Islands are totally …
Cruise Details
0
Aida Maria
from$30,987
EXPLORE

Private Charter - Southern Islands Aboard Aida Maria

4 Day Itinerary aboard Aida Maria
  • Snorkel with tropical fish
  • Visit the Charles Darwin Station
  • Take a dingy ride to see sea lions
Starts / Ends:
Baltra / San Cristobal Airport
Activities:
Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
This 4-day budget Galapagos cruise is one of the most economical ways to cruise the Galapagos while on the Aida Maria, a yacht with an excellent reputation for good service and value. Take this quick private trip to visit places like the Charles Darwin Station, Puerto Ayora, Devil's Crown,and …
Cruise Details
0
Beach on Isabela island
from$5,550
EXPLORE

Naturalist Cruise

Baltra - Seymour - 8 Day Itinerary aboard Galaxy Diver II
  • Explore diverse wildlife
  • Snorkel among marine animals
  • Hike Tagus Cove
  • Discover Rabida's red lava rocks
Starts / Ends:
Baltra / Charles Darwin Center
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Embark on an 8-day Galapagos Naturalist cruise aboard Galaxy Diver II. Explore Bachas Beach, known for its WWII history, where sea turtles nest and vibrant marine life thrives. Hike through Pahoehoe lava, discovering pioneer plants and diverse bird species. Dive into coral sand beaches for …
Cruise Details
0
Blue-footed boobies perched on volcanic rocks
from$7,845
EXPLORE

South & East Islands

7 Day Itinerary aboard Galapagos Horizon
  • Explore the highlands of Santa Cruz
  • Spot blue-footed boobies
  • Stroll along Gardner Bay
  • Visit La Galapaguera
Starts / Ends:
Baltra / Baltra
Activities:
Hiking, Kayaking, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Embark on a 7-day exploration of the Galapagos Islands aboard the Horizon. Begin with a visit to the Twin Craters and Highlands of Santa Cruz where lush greenery and surreal lava tunnels await. Post Office Bay, Devil’s Crown, and Cormorant Point offer opportunities to snorkel, marvel at …
Cruise Details
0
Snorkeling the tropical waters of the Galapagos islands.
from$20,720
EXPLORE

West & East Galapagos

Santa Cruz - Baltra - 15 Day Itinerary aboard Aqua Mare
  • Enjoy Daphne Island's view
  • Visit Mosquera Islet
  • Discover Caleta Tagus
  • Explore Punta Moreno's lava rocks
Starts / Ends:
Puerto Ayora / Punta Suarez
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Stand Up Paddle Boarding, Wildlife Viewing
Activity Level:
Variable
Combining Aqua's east and west itineraries into a 14-night exploration of the Galapagos Archipelago enables the most thorough discovery of the archipelago's hidden treasures. Sailing from Puerto Ayora, no two adventures are alike, as each island's unique environmental circumstances …
Cruise Details
0
San Cristobal
from$6,995
EXPLORE

East Central & Northwestern Islands

11 Day Itinerary aboard M/Y Monserrat
  • Enjoy Tijeretas Hill
  • Visit Gardner Bay's beach
  • Explore Punta Suárez
  • Discover Black Turtle Cove
Starts / Ends:
San Cristobal / Puerto Egas
Activities:
Kayaking, Small Ship Cruises, Snorkeling, Stand Up Paddle Boarding, Wildlife Viewing
Activity Level:
Variable
Take an 11-day cruise through the islands of the Galapagos, aboard the charming and comfortable M/Y Monserrat. Spend your days exploring the enchanted archipelago, encountering Galapagos giant turtles, sea lions, sea turtles, marine iguanas, rays, and much more! Visit some of the most popular …
Cruise Details
0
Beluga ship in the Galapagos
from$90,000
EXPLORE

Private Charter - Western Islands Aboard Beluga

8 Day Itinerary aboard Beluga
  • Spot incredible wildlife
  • Explore volcanic landscapes
  • See unique species of birds
  • Explore with your private group
Starts / Ends:
Baltra / Baltra
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Highlights of the west include beautiful Santa Cruz, wildlife-rich Isabela, cliff-laden Fernandina, and the amazing black beaches of Santiago. Get ready to see an abundance of unique wildlife including flamingos, frigate birds, iguanas, and enjoy some friendly interaction with the islands playful …
Cruise Details
0
Sea kayaking expedition in the Galapagos
from$12,306
EXPLORE

Islands Circumnavigation

15 Day Itinerary aboard Seaman Journey
  • See diverse wildlife and birds
  • Snorkel with sea lions
  • Hike along lava flow Pahohoe
  • Relax on volcanic black sand beach
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Experience an Islands Circumnavigation on your Galapagos tour aboard the Seaman Journey. This 15-day adventure cruise highlights the best of the Galapagos archipelago and treats travelers to snorkeling with sea lions, exploring reef systems, and viewing the famous Galapagos tortoises.
Cruise Details
0
Colorful South Plaza Island
from$3,516
EXPLORE

Northern Islands

5 Day Itinerary aboard Seaman Journey
  • Hike along lava flow Pahohoe
  • Snorkel with sea lions
  • Relax on volcanic black sand beach
  • Marvel at Bartolome Island
Starts / Ends:
Baltra / San Cristobal Airport
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Embark on a captivating 5-day voyage aboard the Seaman Journey Catamaran to discover the wonders of the Galapagos Islands. Begin your adventure with the stark beauty of Bartolome Island, where volcanic landscapes and marine turtle habitats await. Wander the contrasting shores of Mosquera Islet and …
Cruise Details
0
Explore secluded shores of the Galapagos on your small ship cruise
from$7,032
EXPLORE

North and South Islands

9 Day Itinerary aboard Seaman Journey
  • Hike along lava flow Pahohoe
  • See red-footed boobies
  • Relax on volcanic black sand beach
  • Marvel at Bartolome Island
Starts / Ends:
Baltra / Baltra
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Embark on a 9-day unforgettable journey through the enchanting Galapagos Islands aboard the Catamaran Seaman Journey. Explore the lunar-like landscapes of Bartolome Island, home to marine turtles and Galapagos penguins. Witness the vibrant contrast of colors at Mosquera Islet and encounter a …
Cruise Details
0
Green sea turtle swimming
from$7,100
EXPLORE

Diving Cruise

8 Day Itinerary aboard Galaxy Diver II
  • Dive into renowned El Derrumbe
  • Explore La Banana dive site
  • Discover Shark Bay
  • Witness dolphins, sharks and more
Starts / Ends:
Baltra / Santa Cruz
Activities:
Scuba Diving, Small Ship Cruises, Snorkeling, Whale Watching, Wildlife Viewing
Activity Level:
Variable
Embark on an 8-day Galapagos Diving cruise aboard the Galaxy Diver II. Start with a safety drill and check dive, immersing yourself in the wonders of the Galapagos Islands. Dive into crystal-clear waters at Punta Carrion, encountering hammerhead and whale sharks. Explore La Banana, La Ventana …
Cruise Details
0
Sea and stone formations in Galapagos
from$10,920
EXPLORE

East Galapagos

Baltra - Santa Cruz - 8 Day Itinerary aboard Aqua Mare
  • Observe a variety of wildlife
  • Explore El Barranco
  • Discover Bahía Sullivan lava flows
  • Enjoy views of iconic Pinnacle Rock
Starts / Ends:
Baltra / Osborn Islet
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Stand Up Paddle Boarding, Wildlife Viewing
Activity Level:
Variable
This extraordinary eight-day expedition leaves from Baltra Island and sails north to Genovesa, which is noted for its huge diversity of bird species, including the world's largest colony of red-footed boobies. A stop at Baha Darwin provides the possibility to snorkel with hammerhead sharks. …
Cruise Details
0
Floreana Island
from$117,705
EXPLORE

Private Charter - Southern Islands Aboard Hermes Ultra Luxury Cruise

4 Day Itinerary aboard Hermes Ultra Luxury Cruise
  • Visit Tijeretas Hill bird colony
  • Discover Floreana Island's beaches
  • Snorkel with sea lions
Starts / Ends:
San Cristobal Airport / Baltra
Activities:
Hiking, Kayaking, Small Ship Cruises, Snorkeling, Stand Up Paddle Boarding, Wildlife Viewing
Activity Level:
Variable
Embark on a 4-day private cruise through the Eastern Galapagos Islands aboard the Hermes Ultra Luxury Cruise. Begin at San Cristóbal Island, exploring Tijeretas and the Galapagos' history at the Interpretation Center. Dive into the archipelago's volcanic origins and conservation …
Cruise Details
0
Beluga ship in the Galapagos
from$90,000
EXPLORE

Private Charter - Eastern Islands Aboard Beluga

8 Day Itinerary aboard Beluga
  • Admire incredible wildlife
  • See unique bird species
  • Explore with your private group
  • Explore volcanic landscapes
Starts / Ends:
Baltra / Genovesa
Activities:
Kayaking, Small Ship Cruises, Snorkeling, Wildlife Viewing
Activity Level:
Variable
Enjoy this 8-day private cruise through the eastern islands of the Galapagos covering some of the most beautiful islands including San Cristobal, South Plaza, Santa Cruz, and Genovesa. Overflowing with wildlife, volcanic wonders, and breathtaking landscapes, this is the perfect vacation choice. …
Cruise Details
0
145-162 of 224 Results

Ecuador Travel Guide

Favorite Ecuador Ecuador All Trips

Top Ecuador Travel Destinations

Ecuador Trips by Departure Date

Top Experiences in Ecuador

Ecuador Trips by Duration

Ecuador Trips by Activity

More Reasons

Why Travel With Adventure Life

All News

Recognized By