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Best Small Ship Cruises to Charles Darwin Center

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Discover the best small ship cruises to Charles Darwin Center—a more personal, crowd-free way to explore stunning coastlines and hidden ports that big ships can't reach. At Adventure Life, we work with top-rated cruise lines visiting places like , and we’ll help match you with the perfect ship and itinerary based on what you love. These cruises start at $1,800 for trips lasting 5 to 15 days in 2026. Tell us about your dream Charles Darwin Center cruise, and our travel experts will help make it a reality.
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    • Charles Darwin Center
Cruise the Galapagos on the Galaxy II ship
from $77,520
EXPLORE

Private Charter - Eastern Islands Aboard EcoGalaxy

6 Day Itinerary aboard EcoGalaxy
  • Swim and snorkel in Bartolome
  • Spot flamingos
  • Hike around Post Office Bay
  • Observe sharks in Gardner Bay
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
The Eastern Islands of the Galapagos are a great place to experience flamingos, whimbrels, tortoises and more. Board the EcoGalaxy for an incredible 6-day private tour of these islands.
Cruise Details
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The beautiful colorful shores of the Galapagos.
from $5,100
Savings
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Western Islands

6 Day Itinerary aboard EcoGalaxy
  • Learn about tortoises of Galapagos
  • Hike along the base of the Volcano
  • Explore Egas Port
  • Ride around Tagus Cove
Starts / Ends
Baltra / Baltra
Activity Level
Variable
Enjoy the Galapagos Islands aboard EcoGalaxy in 6 days, where you explore magical landscapes with unique wildlife like giant tortoises, flamingos, iguanas, and sharks. There is an endless list of activities to do on the different islands: Santa Cruz, Isabela, Fernandina, Rabida and Santiago.
Cruise Details
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Exploring the Galapagos - Kicker Rock
from $6,190
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Northern Islands Cruise

5 Day Itinerary aboard M/C Elite
  • Visit Charles Darwin R. Station
  • Snorkel across Darwin Bay
  • Discover the beautiful Kicker Rock
Starts / Ends
Baltra / San Cristobal
Activity Level
Variable
Board the Elite for a 5-Day sailing expedition across one of the most unique archipelagos on the planet, the Galapagos Islands. Experience the beauty and natural charm of these volcanic islands while visiting Santa Cruz, Genovesa, Rabida and San Cristobal.
Cruise Details
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Sea Lions lounging in Buccaneer Cove
from $2,900
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Western Islands

5 Day Itinerary aboard Nemo II
  • Ride a zodiac in Tagus Cove
  • Explore the cliffs of Isabela
  • Climb Prince Phillip's Steps
  • Take a trail to a flamingo lagoon
Starts / Ends
Baltra / Baltra
Activities
Small Ship Sailing
Activity Level
Variable
Get close to giant tortoises on a tour of the Western Islands Discover the history behind Buccaneer Cove and take a stroll along a coral reef on this 5-day cruise aboard the Nemo II.
Cruise Details
0
Elizabeth Bay, Isabela Island, Galapagos, Sea Lion
from $2,670
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Central Islands II

5 Day Itinerary aboard Fragata
  • Relax on Tortuga Bay
  • Visit history places
  • Hike to Dragon Hill
Starts / Ends
Baltra / Baltra
Activity Level
Variable
Discover the stunning landscape of Galapagos aboard Fragata yacht in 5 days, where you enjoy in a panga ride on Black Turtle, snorkeling at red beach on Rabida, learns about history in wall of tears and observe a unique wildlife in Santa Cruz.
Cruise Details
0
Cruise the Galapagos on the Galaxy II ship
from $77,520
EXPLORE

Private Charter - Western Islands Aboard EcoGalaxy

6 Day Itinerary aboard EcoGalaxy
  • Learn about tortoises of Galapagos
  • Hike along the base of the Volcano
  • Explore Egas Port
  • Ride around Tagus Cove
Starts / Ends
Baltra / Baltra
Activity Level
Variable
Experience the Galapagos Islands aboard EcoGalaxy in 6 days, where you explore magical landscapes with unique wildlife like giant tortoises, flamingos, iguanas, and sharks with your private group of up to 16 guests!
Cruise Details
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A distant view of Kicker Rock
from $4,350
Savings
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Western Islands

7 Day Itinerary aboard Bonita
  • Discover Dragon Hill
  • Visit Espumilla Beach
  • See unique wildlife at Vicente Roce
  • Hike across Urbina Bay
Starts / Ends
Baltra / Charles Darwin Center
Activity Level
Variable
Embark on a Galapagos cruise aboard the Bonita. This 7-day tour of the western islands takes you to white beaches, secluded lagoons, and pristine snorkeling locations for an unforgettable week-long tour of the Galapagos.
Cruise Details
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Black Turtle cove with mangroves
from $4,200
Savings
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Northern Islands

5 Day Itinerary aboard Alya
  • Swim and snorkel at Darwin Bay
  • Discover Genovesa Island's birdlife
  • Hike to Dragon Hill
Starts / Ends
Baltra / Charles Darwin Center
Activity Level
Variable
Sail to one of the most unique archipelagos in the world on this 5-day Galapagos Islands cruise aboard the Alya catamaran. The Galapagos Islands are teeming with sea life including blue-footed boobies, giant tortoises, land and marine iguanas, sea lions, and penguins.
Cruise Details
0
from $2,595
Savings
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Eastern Islands

4 Day Itinerary aboard M/Y Monserrat
  • Snorkel Lobos Island reef
  • Explore Gardner Bay beach
  • Visit Post Office Bay
  • Observe waved albatross nesting
Starts / Ends
San Cristobal / Baltra
Activity Level
Variable
Embark on a 4-day exciting cruise aboard M/Y Monserrat and enjoy the beautiful turquoise water and its incredible sea life that captures the best of the Galapagos wildlife. Visit the stunning San Cristobal, Gardner Bay, Cormorant Point, and many more.
Cruise Details
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Corals during the sunset
from $91,559
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Private Charter - Galapagos Western Islands Aboard Corals

8 Day Itinerary aboard Corals
  • Discover Vicente Roca Point
  • Take a dinghy ride along Isabela
  • Explore the volcanic Urbina Bay
  • Visit Santa Fe's sea lion colonies
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Discover the Galapagos Islands' western and eastern regions on a private charter cruise aboard the Corals for an 8-day expedition. Visit Fernandina to see flightless cormorants, Sullivan Bay to walk over solidified lava flows, and Santa Fe to swim with sea lions on white-sand beaches. Overall, this is the perfect place to relax and enjoy your vacation.
Cruise Details
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Coral I
from $45,787
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Private Charter - Galapagos Northeast Islands Aboard Corals

4 Day Itinerary aboard Corals
  • Explore the Charles Darwin Station
  • Visit Mosquera Islet´s sea lions
  • Walk in South Plaza´s cactus forest
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Delight yourself with close encounters with the Galapagos tortoises, sea lions, sharks, and blue-footed boobies during this 4-day private cruise across the northeast islands of the Galapagos and experience the best of the archipelago, visiting a variety of locations such as the Charles Darwin Station, Mosquera Islet, North Seymour, San Cristobal, and more!
Cruise Details
0
Sea lion on Santiago Island in the Galapagos
from $8,000
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Western Islands

Baltra roundtrip - 8 Day Itinerary aboard M/Y Passion
  • Visit the Charles Darwin Station
  • Uncover Floreana's rich history
  • Snorkel at Devils Crown
  • Witness unique wildlife
Starts / Ends
Baltra / Baltra
Activities
Whale Watching
Activity Level
Relaxed
Embark on an 8-day Western Galapagos Islands cruise aboard M/Y Passion. Explore Santa Cruz, visit the Charles Darwin Station, and snorkel at Devils Crown. Discover Floreana's history, Isabela's diverse landscapes, and unique wildlife on Fernandina and Santiago Islands, and relax at beautiful beaches. Disembark after an incredible adventure.
Cruise Details
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Giant Tortoise
from $8,000
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Eastern Islands

Baltra roundtrip - 8 Day Itinerary aboard M/Y Passion
  • Witness Caleta Tortuga's mangrove
  • Encounter Galapagos giant tortoises
  • Observe frigate birds
  • Discover Genovesa's caldera
Starts / Ends
Baltra / Baltra
Activity Level
Relaxed
Discover the Eastern Galapagos Islands on this 8-day cruise aboard M/Y Passion. Explore Santa Cruz, Genovesa, Bartolome, and more. Discover unique wildlife, beautiful landscapes, and snorkeling sites. Visit Charles Darwin Station, enjoy white sandy beaches, and witness diverse ecosystems. Conclude with Twin Craters before returning to Baltra.
Cruise Details
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Green sea turtle swimming
from $6,504
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Southern Islands

San Cristobal - Baltra - 4 Day Itinerary aboard Hermes Ultra Luxury Cruise
  • Visit Tijeretas Hill bird colony
  • Discover Floreana Island's beaches
  • Snorkel with sea lions
Starts / Ends
San Cristobal Airport / Baltra
Activity Level
Variable
Set sail on a 4-day Hermes Ultra Luxury Cruise to the Eastern Galapagos Islands. Explore San Cristóbal, and visit Tijeretas Hill. Enjoy Gardner Bay and Punta Suárez on Española, then discover unique beaches, flamingos, and marine life at Punta Cormorant on Floreana. Conclude your journey at the Charles Darwin Research Station and fly back home.
Cruise Details
0
Sea Lion resting on Red Sesuvium
from $5,155
EXPLORE

Galapagos Western Islands

8 Day Itinerary aboard Corals
  • Discover Vicente Roca Point
  • Take a dinghy ride along Isabela
  • Explore the volcanic Urbina Bay
  • Visit Santa Fe's sea lion colonies
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
​Join an 8-day cruise exploring the magical secrets of the Galapagos archipelago, visiting incredible locations, and indulging yourself in the exotic beauty of the unique landscapes that only the Galapagos can offer.
Cruise Details
0
Sea lion on the beach of Espanola Island
from $3,150
EXPLORE

Southern Islands

San Cristobal - Baltra - 4 Day Itinerary aboard Anahi
  • Explore the Interpretation Center
  • Observe Frigate birds
  • Discover Punta Suárez's wildlife
Starts / Ends
San Cristobal Airport / Baltra
Activity Level
Variable
Embark on a 4-day Southern Galapagos Islands cruise aboard Anahi. Explore San Cristobal's Interpretation Center and 'La Colina de las Fragatas'. Encounter diverse wildlife at Punta Suárez and Bahía Gardner. Visit Punta Cormorant's flamingo lagoon and snorkel at Devil's Crown. Discover Bahía "Post Office" and Asilo de la Paz.
Cruise Details
0
Land Iguana in the Galapagos
from $2,527
EXPLORE

Galapagos Northeast Islands

4 Day Itinerary aboard Corals
  • Explore the Charles Darwin Station
  • Visit Mosquera Islet´s sea lions
  • Walk in South Plaza´s cactus forest
Starts / Ends
Baltra / San Cristobal Airport
Activity Level
Variable
Spend 4 days cruising the northeast islands of the Galapagos and experience the best of the archipelago, visiting a variety of locations such as the Charles Darwin Station, Mosquera Islet, North Seymour, San Cristobal, and more! Delight yourself with close encounters with the Galapagos tortoises, sea lions, sharks, and blue-footed boobies.
Cruise Details
0
Devil's Crown Galapagos
from $4,100
EXPLORE

East and South Islands

San Cristobal to Santa Cruz - 5 Day Itinerary aboard EcoGalaxy
  • Snorkel at Devil’s Crown
  • Observe sea lion colonies
  • Encounter land iguanas
Starts / Ends
San Cristobal / Baltra
Activities
Hiking, Snorkeling, Wildlife Viewing, Kayaking, Stand Up Paddle Boarding
Activity Level
Variable
Embark on a 5-day East and South Galapagos cruise aboard Ecogalaxy. Visit San Cristobal, Española, Floreana, Santa Fe, and South Plaza. Snorkel with sea lions and turtles, hike volcanic trails, and observe rare wildlife including waved albatrosses and giant tortoises.
Cruise Details
0
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